The detailed information of tRNA gene sequence


Sequence ID>A17A000324
Genome IDCP001899
Search identical group
Phylum/ClassEuryarchaeota
SpeciesFerroglobus placidus DSM 10642 [CP001899]
Start position on genome 1139897
End posion on genome 1139996
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aactgaagtc
tRNA gene sequence 
CCCGGCTTAGCTCAGTGGCAGAGCGCGGGCCTGTAGAGCCCGTGGTCCCCGGTTCAAATC
CGGGAGCCGGGAtac
Downstream region at tRNA end position 
cttatttttg
Secondary structure (Cloverleaf model)
>A17A000324	Tyr	GTA
                   c      Atac cttatttttg
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     G G G C C     A
        G A        A      | | | | |     A
      T     C T C G       C C C G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     TGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T*A
intron: position=36, length=28 (in A-loop)
AGTCTGACCTGCCGCTGGCAGGCGGCAG
Intron
Comment/Decision
Genome/Seq. Info.-

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