The detailed information of tRNA gene sequence


Sequence ID>A17A000325
Genome IDCP001899
Search identical group
Phylum/ClassEuryarchaeota
SpeciesFerroglobus placidus DSM 10642 [CP001899]
Start position on genome 1643868
End posion on genome 1644003
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcttattcga
tRNA gene sequence 
GGGGCCGTGGCGTAGCCAGGAAGCGCGGCGGGCTCCAGACCCGCCAGTCGTGGGTTCAAA
TCCCACCGGCCCCAttt
Downstream region at tRNA end position 
ttatgggttc
Secondary structure (Cloverleaf model)
>A17A000325	Trp	CCA
                   a      Attt ttatgggttc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    C       T G C G       G T G G G     C
    A       + | | |                 T T
    G       G C G C
      G A A        G     CAGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    C C*A
intron: position=36, length=62 (in A-loop)
AGCGGCGTGATGACTGATGGGTCTGCTGAGCGGTGATGATCCGCTGGAGTACTGACCCGGGG
Intron
Comment/Decision
Genome/Seq. Info.-

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