The detailed information of tRNA gene sequence


Sequence ID>A17A000349
Genome IDCP001939
Search identical group
Phylum/ClassThermoproteota
SpeciesThermosphaera aggregans DSM 11486 [CP001939]
Start position on genome 979097
End posion on genome 979008
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
taaaatggaT
tRNA gene sequence 
CCCGCGGTAGCTCAGCGGCAGAGCGCCCGGCTGTAGTCCGGGTGGCCGGGGGTTCAATTC
CCCCCCGCGGGATCC
Downstream region at tRNA end position 
Attccacatg
Secondary structure (Cloverleaf model)
>A17A000349	Tyr	GTA
                   T      ATCC Attccacatg
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T T
                    T     C C C C C     A
        G A        A      | | | | |     A
      C     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     TGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       T *
                  T       G
                    G T A
intron: position=39, length=13 (in A-loop)
GGGGCCACAGTCA
Intron
Comment/Decision
Genome/Seq. Info.-

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