The detailed information of tRNA gene sequence


Sequence ID>A17A000425
Genome IDCP002051
Search identical group
Phylum/ClassThermoproteota
SpeciesStaphylothermus hellenicus DSM 12710 [CP002051]
Start position on genome 210005
End posion on genome 210108
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
gtattggtat
tRNA gene sequence 
GCGGCGGTCGTCTAGCCTGGACTAGGACGCCGGCCTGCCATGCCGGAGATCCCGGGTTCA
AATCCCGGCCGCCGCACCA
Downstream region at tRNA end position 
tttctcatat
Secondary structure (Cloverleaf model)
>A17A000425	Gly	GCC
                   t      ACCA tttctcatat
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    A C T A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       T *
                  T       A
                    G C C
intron: position=39, length=25 (in A-loop)
ACGGGTTCGTGTAGCCGTGTAGAAC
Intron
Comment/Decision
Genome/Seq. Info.-

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