The detailed information of tRNA gene sequence


Sequence ID>A17A000426
Genome IDCP002051
Search identical group
Phylum/ClassThermoproteota
SpeciesStaphylothermus hellenicus DSM 12710 [CP002051]
Start position on genome 966631
End posion on genome 966730
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aatatggggt
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGAAGAGCGCCGCCCTCGCGAGGCGGAGGTCCCGGGTTCAAA
TCCCGGCCGGTCCACCA
Downstream region at tRNA end position 
tttacataaa
Secondary structure (Cloverleaf model)
>A17A000426	Ala	CGC
                   t      ACCA tttacataaa
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    C G C *
intron: position=37, length=23 (in A-loop)
ATACCATGTTACCGGGGTCGAGG
Intron
Comment/Decision
Genome/Seq. Info.-

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