The detailed information of tRNA gene sequence


Sequence ID>A17A000432
Genome IDCP002051
Search identical group
Phylum/ClassThermoproteota
SpeciesStaphylothermus hellenicus DSM 12710 [CP002051]
Start position on genome 1494986
End posion on genome 1495088
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
atatagagta
tRNA gene sequence 
GCCGCCGTAGCTCAGCCCGGTAGAGCGCCGGCCTCGTGAGCCGGTGGTCGCGGGTTCAAA
TCCCGCCGGCGGCTCtt
Downstream region at tRNA end position 
agttaaacct
Secondary structure (Cloverleaf model)
>A17A000432	Thr	CGT
                   a      TCtt agttaaacct
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       G C G G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C G T *
intron: position=37, length=28 (in A-loop)
ATCGGTTACCTAATCACCGGAGTCGGGG
Intron
Comment/Decision
Genome/Seq. Info.-

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