The detailed information of tRNA gene sequence


Sequence ID>A17A000469
Genome IDCP002100
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta distributa DSM 14429 [CP002100]
Start position on genome 1416757
End posion on genome 1416865
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
catcaatcct
tRNA gene sequence 
GCGGGGGTGCCCGAGCCAGGTCAAAGGGGACGGGCTCGAATCCCGTTGGCGAAGGCCTGC
GTGGGTTCGAATCCCACCCCCCGCACCA
Downstream region at tRNA end position 
gaaactgaat
Secondary structure (Cloverleaf model)
>A17A000469	Ser	CGA
                   t      ACCA gaaactgaat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     G
  A         G C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    T C A A        G     TGGCGAAGGCCTGC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       T
                  T       A
                    C*G A
intron: position=35, length=21 (in A-loop)
AGATGTGCGTTTTGCACATGG
Intron
Comment/Decision
Genome/Seq. Info.-

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