The detailed information of tRNA gene sequence


Sequence ID>A17A000474
Genome IDCP002100
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta distributa DSM 14429 [CP002100]
Start position on genome 1699062
End posion on genome 1698971
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ggcttccctt
tRNA gene sequence 
GGGCCGGTAGTCTAGCCTGGAAGGATGCCCGCCTTGCACGCGGGAGATCCCGGGTTCAAA
TCCCGGCCGGTCCACCA
Downstream region at tRNA end position 
caaaatcatt
Secondary structure (Cloverleaf model)
>A17A000474	Ala	TGC
                   t      ACCA caaaatcatt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       T C T G       C C G G G     C
    T       + | | +                 T T
    G       G G A T
      G A A        G     AGATC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C *
                  T       A
                    T G C
intron: position=39, length=15 (in A-loop)
GGAGCTCCCAAGAAC
Intron
Comment/Decision
Genome/Seq. Info.-

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