The detailed information of tRNA gene sequence


Sequence ID>A17A000475
Genome IDCP002100
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta distributa DSM 14429 [CP002100]
Start position on genome 1786525
End posion on genome 1786419
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
taatgatctt
tRNA gene sequence 
GCGGGGGTGCCCGAGCCAGGTCAAAGGGGGCGGGTTGAGGTCCCGTTGGCGAAGGCCTGC
GTGGGTTCAAATCCCACCCCCCGCACCA
Downstream region at tRNA end position 
gggcagtagg
Secondary structure (Cloverleaf model)
>A17A000475	Leu	GAG
                   t      ACCA gggcagtagg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     A
  A         G C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    T C A A        G     TGGCGAAGGCCTGC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  T*      T
                  T       G
                    G A G
intron: position=33, length=19 (in A-loop)
AGGATAACAATCCCCGCAA
Intron
Comment/Decision
Genome/Seq. Info.-

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