The detailed information of tRNA gene sequence


Sequence ID>A17A000493
Genome IDCP002363
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus mucosus DSM 2162 [CP002363]
Start position on genome 994098
End posion on genome 993993
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aattagtgaa
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGTCTAAGGCGGCGGGCTGCAGACCCGTTTATCCGCGGGTTCGA
ATCCCGCCCCCGGCTCtc
Downstream region at tRNA end position 
caccatgcag
Secondary structure (Cloverleaf model)
>A17A000493	Cys	GCA
                   a      TCtc caccatgcag
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TTATCC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    G C*A
intron: position=36, length=30 (in A-loop)
AGGGCACACCCACTGCAAAGGGGTTCACGG
Intron
Comment/Decision
Genome/Seq. Info.-

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