The detailed information of tRNA gene sequence


Sequence ID>A17A000500
Genome IDCP002408
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrososphaera gargensis Ga9.2 [CP002408]
Start position on genome 117545
End posion on genome 117650
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ttttctggcg
tRNA gene sequence 
GCCTTCGTAGTATAGCCTGGTCAGTATAGGCGGCTGTAAACCGCTTGAGGAGGGTTCAAA
TCCCTCCGAAGGCCCCA
Downstream region at tRNA end position 
tttttcaata
Secondary structure (Cloverleaf model)
>A17A000500	Tyr	GTA
                   g      CCCA tttttcaata
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C C G A        A      | | | | |     A
  T         T A T G       G A G G G     C
  G         + | | +                 T T
  G         G T A T
    T C A          A     TGAG
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T*A
intron: position=36, length=29 (in A-loop)
GGCCGGTTTCTCAAGAAACTTTTCGGCAG
Intron
Comment/Decision
Genome/Seq. Info.-

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