The detailed information of tRNA gene sequence


Sequence ID>A17A000501
Genome IDCP002408
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrososphaera gargensis Ga9.2 [CP002408]
Start position on genome 496265
End posion on genome 496370
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gacttttcga
tRNA gene sequence 
GGGGCCATAGTCTAGCTTGGTCTAGGATGTCAGACTGGGGCGCTGGAGATCGTGGGTTCA
AATCCCACTGGCCCCACCA
Downstream region at tRNA end position 
tagtaatggg
Secondary structure (Cloverleaf model)
>A17A000501	Pro	GGG
                   a      ACCA tagtaatggg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     C A C C C     A
    T C G A        A      | | | | |     A
  T         T C T G       G T G G G     C
  G         + | | +                 T T
  G         G G A T
    T C T A        G     AGATC
                    T + G
                    C - G
                    A - T
                    G - C
                   *A   G
                  C       C
                  T       G
                    G G G
intron: position=32, length=27
GGTTGCTATAAAAAACAACCGACGAAC
Intron
Comment/Decision
Genome/Seq. Info.-

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