The detailed information of tRNA gene sequence


Sequence ID>A17A000548
Genome IDCP002588
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus veneficus SNP6 [CP002588]
Start position on genome 36551
End posion on genome 36656
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
actacccaaa
tRNA gene sequence 
GCCCGGGTGGTGTAGCCCGGCCTATCATGCGGGCCTGTAAAGCCCGCGACTCGGGTTCAA
ATCCCGACCCGGGCGCtc
Downstream region at tRNA end position 
ctttttcatt
Secondary structure (Cloverleaf model)
>A17A000548	Tyr	GTA
                   a      GCtc ctttttcatt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     A G C C C     A
    C C G A        G      | | | | |     A
  C         T G T G       T C G G G     C
  G           | | +                 T T
  G         T C A T
    C C T A        G     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T*A
intron: position=36, length=30 (in A-loop)
CGCGGGTGTTGTGTTCGGCAGCATCCGCAG
Intron
Comment/Decision
Genome/Seq. Info.-

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