The detailed information of tRNA gene sequence


Sequence ID>A17A000600
Genome IDCP002818
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus acidocaldarius Ron12/I [CP002818]
Start position on genome 458725
End posion on genome 458633
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tattaatatT
tRNA gene sequence 
GCGGCCGTCGTCTAGTCTGGATTAGGACGCTGGCCTGGAAAGCCAGCAATCCCGGGTTCG
AATCCCGGCGGCCGCATtc
Downstream region at tRNA end position 
atacttctct
Secondary structure (Cloverleaf model)
>A17A000600	Ser	GGA
                   T      ATtc atacttctct
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C T G A        C      | | | | |     G
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    A T T A        G     CAATC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C*      A
                  T       A
                    G G A
intron: position=33, length=15 (in A-loop)
TCCCATTCTTTAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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