The detailed information of tRNA gene sequence


Sequence ID>A17A000605
Genome IDCP002838
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrolobus fumarii 1A [CP002838]
Start position on genome 127896
End posion on genome 127788
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgggttctgt
tRNA gene sequence 
GCCGGGGTGCCCGAGCGGTCGAAGGGGCGGGGCTGCAAACCCCGTTAATCCCGGGTTCGA
ATCCCGGCCCCGGCTCCA
Downstream region at tRNA end position 
ttctcctcta
Secondary structure (Cloverleaf model)
>A17A000605	Cys	GCA
                   t      TCCA ttctcctcta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     G
    G       G C C C       C C G G G     C
    G         | | |                 T T
    T       A G G G
      C G A        G     TTAATC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    G C*A
intron: position=36, length=31 (in A-loop)
AGTGGCGGCTACCGTTGGTGTCCGCCCGTCG
Intron
Comment/Decision
Genome/Seq. Info.-

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