The detailed information of tRNA gene sequence


Sequence ID>A17A000610
Genome IDCP002838
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrolobus fumarii 1A [CP002838]
Start position on genome 750514
End posion on genome 750409
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atggtacagt
tRNA gene sequence 
GCCGCCGTAGCTCAGCGGGAGAGCGCCCGGCTGCAGACCGGGAGGTCCGGGGTTCGAATC
CCCGCGGCGGCACCA
Downstream region at tRNA end position 
tcctcctctc
Secondary structure (Cloverleaf model)
>A17A000610	Cys	GCA
                   t      ACCA tcctcctctc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
        G A        A      | | | | |     G
      C     C T C G       C G G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    G*C A
intron: position=35, length=31 (in A-loop)
ATCCGCACACCCAGTGAGGGGTGCGGGGCCA
Intron
Comment/Decision
Genome/Seq. Info.-

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