The detailed information of tRNA gene sequence


Sequence ID>A17A000790
Genome IDCP003168
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum sp. MAR08-339 [CP003168]
Start position on genome 253637
End posion on genome 253757
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ccttcttgct
tRNA gene sequence 
GGGGCCGTGGGGTAGCTTGGCATCCTTCCGGCTTCAAGAGCCGGAGACTCGAGTTCAAAT
CTCGGCGGCCCCACtg
Downstream region at tRNA end position 
aaccaacatt
Secondary structure (Cloverleaf model)
>A17A000790	Leu	CAA
                   t      ACtg aaccaacatt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C T C     A
      C G A        G      + | | | |     A
    T       T G G G       T C G A G     C
    T         | | +                 T T
    G       T C C T
      G C A        T     AGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    C*A A
intron: position=35, length=47 (in A-loop)
GGGTGTGAAGGGGCACCAAGGTTCCCCTTTCAAAACCCCTCCTCCGG
Intron
Comment/Decision
Genome/Seq. Info.-

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