The detailed information of tRNA gene sequence


Sequence ID>A17A000792
Genome IDCP003168
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum sp. MAR08-339 [CP003168]
Start position on genome 765057
End posion on genome 764929
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctatcccagt
tRNA gene sequence 
GCCACCGTAGCTTAGCCCGGAAGAGCGGCTGACTTGAAATCAGCAGGTCGGGGGTTCGAA
TCCCCCCGGTGGCTCtt
Downstream region at tRNA end position 
attattcgat
Secondary structure (Cloverleaf model)
>A17A000792	Ser	TGA
                   t      TCtt attattcgat
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
      C G A        A      | | | | |     G
    C       T T C G       G G G G G     C
    C       + | | |                 T T
    G       G A G C
      G A A        G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T*G A
intron: position=35, length=54 (in A-loop)
GTAAGAGCCCTTTCTCTAAAGAGAAAGCGCTTCATCGGAAAGAGAGGGCACCGG
Intron
Comment/Decision
Genome/Seq. Info.-

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