The detailed information of tRNA gene sequence


Sequence ID>A17A000821
Genome IDCP003321
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus amylolyticus DSM 16532 [CP003321]
Start position on genome 1272242
End posion on genome 1272141
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaccaggtat
tRNA gene sequence 
GCCGCCGTAGCTCAGCCCGGTGGAGCGCCGGCCTCGAAAGCCGGTGGACGCGGGTTCAAA
TCCCGCCGGCGGCTttc
Downstream region at tRNA end position 
ttcatagttc
Secondary structure (Cloverleaf model)
>A17A000821	Ser	CGA
                   t      Tttc ttcatagttc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       G C G G G     C
    C       | | | |                 T T
    G       G A G C
      G T G        G     TGGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C*G A
intron: position=35, length=28 (in A-loop)
GTATCGGCTTATTGAACCGGAGTCGTTG
Intron
Comment/Decision
Genome/Seq. Info.-

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