The detailed information of tRNA gene sequence


Sequence ID>A17A000893
Genome IDCP003378
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldisphaera lagunensis DSM 15908 [CP003378]
Start position on genome 907346
End posion on genome 907436
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttaatatgga
tRNA gene sequence 
GGGCCCGTAGTCCAGTTTGGCAGGATGCGGGGTTCGGGTCCCTGTGGTCGGGGGTTCAAA
TCCCCCCGGGCCCAtaa
Downstream region at tRNA end position 
atattaatga
Secondary structure (Cloverleaf model)
>A17A000893	Pro	CGG
                   a      Ataa atattaatga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
      T G A        A      | | | | |     A
    T       C C T G       G G G G G     C
    T       | | | +                 T T
    G       G G A T
      G C A        G     TGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    G - C
                  T*      T
                  T       G
                    C G G
intron: position=33, length=17 (in A-loop)
ATGCATATGCACCCGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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