The detailed information of tRNA gene sequence


Sequence ID>A17A000944
Genome IDCP003531
Search identical group
Phylum/ClassThermoproteota
SpeciesThermogladius calderae 1633 [CP003531]
Start position on genome 696981
End posion on genome 696869
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taaagatgga
tRNA gene sequence 
GCCGCCGTAGCTCAGCCCGGCTAGAGCGCCGGACTCGAGATCCGGTTGTCCCGGGTTCAA
ATCCCGGCGGCGGCACtc
Downstream region at tRNA end position 
gctcctattt
Secondary structure (Cloverleaf model)
>A17A000944	Ser	CGA
                   a      ACtc gctcctattt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     TTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C*G A
intron: position=35, length=37 (in A-loop)
ATACGGGTGGTACGTCACCGAGGTTGGTGGCCCAGGG
Intron
Comment/Decision
Genome/Seq. Info.-

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