The detailed information of tRNA gene sequence


Sequence ID>A17A001116
Genome IDCP007026
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopelagicus brevis CN25 [CP007026]
Start position on genome 322535
End posion on genome 322413
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aaaaagatgt
tRNA gene sequence 
CCCCACTTAGCTCAGCCTGGTAGAGCTTCCGACTGTAAATCGGGTTGTCGAAGGCTCAAA
TCCTTCAGTGGGGACCA
Downstream region at tRNA end position 
ttttttaatt
Secondary structure (Cloverleaf model)
>A17A001116	Tyr	GTA
                   t      ACCA ttttttaatt
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     T - A          T A
                    T     C T T C C     A
      C G A        A      | | | | |     A
    C       C T C G       G A A G G     C
    T       | | | |                 C T
    G       G A G C
      G T A        T     TTGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G T*A
intron: position=36, length=46 (in A-loop)
AGTTGTCGGCTTAGGGCTGAATAACAGTAGTCTACTAGGCATACAG
Intron
Comment/Decision
Genome/Seq. Info.-

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