The detailed information of tRNA gene sequence


Sequence ID>A17A001193
Genome IDCP007493
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1505 [CP007493]
Start position on genome 1654006
End posion on genome 1654109
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttatttctta
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGTCCAAGGCGGTGGACTGGAGATCCACTACCCCAAAAGGGTGC
CCGGGTTCAAATCCCGGCCCCGGCGCCA
Downstream region at tRNA end position 
ttctacttct
Secondary structure (Cloverleaf model)
>A17A001193	Ser	GGA
                   a      GCCA ttctacttct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     A
    G       G C C G       C C G G G     C
    G         | | |                 T T
    T       A G G C
      C C A        G     TACCCCAAAAGGGTGC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C*      A
                  T       G
                    G G A
intron: position=33, length=16 (in A-loop)
ACCCGAGAGGCCACAA
Intron
Comment/Decision
Genome/Seq. Info.-

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