The detailed information of tRNA gene sequence


Sequence ID>A17A001303
Genome IDCP010070
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanoplasma termitum MpT1 [CP010070]
Start position on genome 1104094
End posion on genome 1104206
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tcatgtgtta
tRNA gene sequence 
CCCCGCCTAGCTCAGCCTGGCCAGAGCGGCTGACTGTAAATCAGCAGGTCCCCGGTTCAA
ATCTGGGGGTGGGGACCA
Downstream region at tRNA end position 
tccatttcta
Secondary structure (Cloverleaf model)
>A17A001303	Tyr	GTA
                   a      ACCA tccatttcta
                     C - G
                     C - G
                     C - G
                     C - G
                     G + T
                     C - G
                     C - G          T A
                    T     G G G T C     A
    C C G A        A      | | | + |     A
  T         C T C G       C C C G G     C
  G         | | | |                 T T
  G         G A G C
    C C A          G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T*A
intron: position=36, length=35 (in A-loop)
AGAAGTGTTCTCGGAGAGATCCGATACAGCCGCTG
Intron
Comment/Decision
Genome/Seq. Info.-

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