The detailed information of tRNA gene sequence


Sequence ID>A17A001483
Genome IDCP012986
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNanohaloarchaea archaeon SG9 [CP012986]
Start position on genome 794401
End posion on genome 794525
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tttttccaat
tRNA gene sequence 
GCCGGGTTGGCAGAGGAGTCATGCAGCGGCCTGCAAAGCCGCCTACCTGGGTGCAAATCC
CAGACCCGGCTttt
Downstream region at tRNA end position 
tcccattcca
Secondary structure (Cloverleaf model)
>A17A001483	Cys	GCA
                   t      Tttt tcccattcca
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     G A C C C     A
        G A        G      | | | | |     A
      G     G A C G       C T G G G     C
      A       | | |                 T G
      G     A T G C
        T C        A     CTAC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    G C A
intron: position=38, length=54 (in A-loop)
GGCCTCAAGTCCCTCTGGGACGAGGATTGAGAAGCGTTCAGCTTCAAGTGAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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