The detailed information of tRNA gene sequence


Sequence ID>A17A001491
Genome IDCP013011
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrodictium delaneyi Su06 [CP013011]
Start position on genome 626713
End posion on genome 626606
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agtaatggac
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGTCGAAGGCGGCGGGCTGCAAACCCGTTGATCCCGGGTTCAAA
TCCCGGCCCCGGCTCCA
Downstream region at tRNA end position 
tctcaaaacc
Secondary structure (Cloverleaf model)
>A17A001491	Cys	GCA
                   c      TCCA tctcaaaacc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     A
    G       G C C G       C C G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGATC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    G C*A
intron: position=36, length=31 (in A-loop)
AGTGGCCTAGACGTATCCGCCCATCGCGTAG
Intron
Comment/Decision
Genome/Seq. Info.-

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