The detailed information of tRNA gene sequence


Sequence ID>A17A001494
Genome IDCP014214
Search identical group
Phylum/ClassUnclassified
Speciesmethanogenic archaeon ISO4-H5 [CP014214]
Start position on genome 272343
End posion on genome 272451
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcttccaacc
tRNA gene sequence 
GTCGGGGTGGCTCAGCCTGGTAGAGCGTCGGACTCGAAATCCGAAGGCCGAGGGTTCGAA
CCCCTCTCCCGACACCA
Downstream region at tRNA end position 
tacttcttca
Secondary structure (Cloverleaf model)
>A17A001494	Ser	CGA
                   c      ACCA tacttcttca
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          C A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    C       C T C G       G A G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C*G A
intron: position=35, length=32 (in A-loop)
ATAGGGTTCAGGTTAAAACTGACCTCACCAGG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK