The detailed information of tRNA gene sequence


Sequence ID>A17A001532
Genome IDCP017006
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus sp. A20 [CP017006]
Start position on genome 487167
End posion on genome 487255
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
cagatatagt
tRNA gene sequence 
GCCGCCGTAGCTCAGCCCGGGAGAGCGCCCGGCTGAGGACCGGGTTGTCCGGGGTTCAAG
TCCCCGCGGCGGCACtt
Downstream region at tRNA end position 
taataaaatc
Secondary structure (Cloverleaf model)
>A17A001532	Leu	GAG
                   t      ACtt taataaaatc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G C C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C G G G G     C
    C       | | | |                 T T
    G       G A G C
      G G A        G     TTGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    G A*G
intron: position=36, length=14 (in A-loop)
AGTTTAAAAAGCAG
Intron
Comment/Decision
Genome/Seq. Info.-

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