The detailed information of tRNA gene sequence


Sequence ID>A17A001567
Genome IDCP019067
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis sp. IM1011 [CP019067]
Start position on genome 1393443
End posion on genome 1393550
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cgcggacaga
tRNA gene sequence 
GGGCCCTTAGCTTAGTCTGGTTAGAGCACCCGGCTCGTAACCGGGCGGTCGGTGGTTCAA
ATCCGCCAGGGCCCAtcg
Downstream region at tRNA end position 
acttcgctgc
Secondary structure (Cloverleaf model)
>A17A001567	Thr	CGT
                   a      Atcg acttcgctgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C C G C C     A
    C T G A        A      | | + | |     A
  T         T T C G       G G T G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          A     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C*G T
intron: position=35, length=33 (in A-loop)
ATACCAATCACTGACAGCGGTCAGGGATTGTGG
Intron
Comment/Decision
Genome/Seq. Info.-

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