The detailed information of tRNA gene sequence


Sequence ID>A17A001583
Genome IDCP019067
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis sp. IM1011 [CP019067]
Start position on genome 3377676
End posion on genome 3377854
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caggtgatgc
tRNA gene sequence 
GGGGTCGTGGCCAAGTCCGGCATGGCGACTGACTCCAGATCAGTCGATCGGGAGTTCAAA
TCTCTCCGACCCCACtt
Downstream region at tRNA end position 
cctgacgaac
Secondary structure (Cloverleaf model)
>A17A001583	Trp	CCA
                   c      ACtt cctgacgaac
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | + | | |     A
    C       A C C G       G G G A G     C
    C       | | | |                 T T
    G       T G G C
      G C A        G     CGATC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G *
                    C C A
intron: position=38, length=104 (in A-loop)
AGGCACCGCGCCCGGTGACGAAACTCCAGACTGATATACTGAGCGGACGGCTGATCACCGCCCGCGCTGA
TGACCCTCTGGAGTTCCGAGGCGCGACCGGAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK