The detailed information of tRNA gene sequence


Sequence ID>A17A001685
Genome IDCP021324
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosomarinus catalina SPOT01 [CP021324]
Start position on genome 924526
End posion on genome 924423
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tagtattgtt
tRNA gene sequence 
GCAGAGGTATCGAAGCCCGGTCAACCGAGAGGGACTCAAGTTCTCTTAGGAGTTCGTGGG
TTCAAATCCCACCCTCTGCACta
Downstream region at tRNA end position 
ttattttact
Secondary structure (Cloverleaf model)
>A17A001685	Leu	CAA
                   t      ACta ttattttact
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     A
  C         A G C T       G T G G G     C
  G           | | |                 T T
  G         C C G A
    T C A A        G     TAGGAGTTC
                    A - T
                    G - C
                    G + T
                    G - C
                    A - T
                  C       T
                  T       G *
                    C A A
intron: position=38, length=23 (in A-loop)
ATCTCTATAATATAGGAAATCCC
Intron
Comment/Decision
Genome/Seq. Info.-

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