The detailed information of tRNA gene sequence


Sequence ID>A17A001696
Genome IDFN869859
Search identical group
Phylum/ClassThermoproteota
SpeciesThermoproteus tenax Kra 1 [FN869859]
Start position on genome 603213
End posion on genome 603121
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atcttactgA
tRNA gene sequence 
GCCGCCGTAGCTAAGCCCGGCATAGCGGCGGACTGCAGACCCGTAGGTCCCGGGTTCAAA
TCCCGGCGGCGGCTTag
Downstream region at tRNA end position 
tttgttctaa
Secondary structure (Cloverleaf model)
>A17A001696	Cys	GCA
                   A      TTag tttgttctaa
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       A T C G       C C G G G     C
    C       | | | |                 T T
    G       T A G C
      G C A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                   *A   C
                  C       A
                  T       G
                    G C A
intron: position=32, length=17
CGAGCCTTCGGCCGCGG
Intron
Comment/Decision
Genome/Seq. Info.-

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