The detailed information of tRNA gene sequence


Sequence ID>A17A001706
Genome IDFN869859
Search identical group
Phylum/ClassThermoproteota
SpeciesThermoproteus tenax Kra 1 [FN869859]
Start position on genome 1294477
End posion on genome 1294572
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcttagaccT
tRNA gene sequence 
AGCGGGGTAGGCCAGCCAGGTAGGCCGCGGGGCTCATAGCCCCGAGGTCCCGGGTTCAAA
TCCCGGCCCCGCTATgt
Downstream region at tRNA end position 
gcacaccggc
Secondary structure (Cloverleaf model)
>A17A001706	Met	CAT
                   T      ATgt gcacaccggc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C C G G       C C G G G     C
    A       | | | |                 T T
    G       G G C C
      G T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       G
                  T       A
                    C A T *
intron: position=37, length=20 (in A-loop)
AAAGGGCCTAAGGCCCGAGG
Intron
Comment/Decision
Genome/Seq. Info.-

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