The detailed information of tRNA gene sequence


Sequence ID>A17A001708
Genome IDFN869859
Search identical group
Phylum/ClassThermoproteota
SpeciesThermoproteus tenax Kra 1 [FN869859]
Start position on genome 1381178
End posion on genome 1381057
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agaagaggag
tRNA gene sequence 
GGGCCCGTAGCTCAGCATGGATAGAGCGGCGGTGTGGAAAGCCGTAGGTCGTGGGTTCGA
ATCCCACCGGGCCCGCtg
Downstream region at tRNA end position 
atctttgcta
Secondary structure (Cloverleaf model)
>A17A001708	Ser	GGA
                   g      GCtg atctttgcta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
    A C G A        A      | | | | |     G
  T         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    A T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T + G
                  G*      A
                  T       A
                    G G A
intron: position=33, length=46 (in A-loop)
GACCCAGCCCAAGTCCGCCGAGCCTCCTAAGGGCGCGTGGCGCCCG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK