The detailed information of tRNA gene sequence


Sequence ID>A178000012
Genome IDAP012489
Search identical group
Phylum/ClassThermoproteota
SpeciesAeropyrum camini SY1 = JCM 12091 [AP012489]
Start position on genome 1396556
End posion on genome 1396443
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gaatagtggt
tRNA gene sequence 
CCCGCCGTAGCTCAGCGGCAGAGCGCCCGGCTGTAGACCGGGTGGTCCGGGGTTCGAATC
CCCGCGGCGGGACCA
Downstream region at tRNA end position 
ctatggtccc
Secondary structure (Cloverleaf model)
>A178000012	Tyr	GTA
                   t      ACCA ctatggtccc
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
        G A        A      | | | | |     G
      C     C T C G       C G G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=39 (in A-loop)
TGGGACACGGGCGGAGTAACCCGGTGTCTCCCCGCAGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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