The detailed information of tRNA gene sequence


Sequence ID>A178000016
Genome IDCP000852
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga maquilingensis IC-167 [CP000852]
Start position on genome 2030736
End posion on genome 2030828
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
acattaacaA
tRNA gene sequence 
GCCCCGGTAGCTCAGCCTGGTCGGAGCGCCCGCCTCGTAAGCGGGAGGTCCCGGGTTCGA
ATCCCGGCCGGGGCTTCa
Downstream region at tRNA end position 
gcgtcttttc
Secondary structure (Cloverleaf model)
>A178000016	Thr	CGT
                   A      TTCa gcgtcttttc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     G
  T         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    T C G          G     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A *
                    C G T
intron: position=38, length=15 (in A-loop)
AGCAAACACTGAGTA
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK