The detailed information of tRNA gene sequence


Sequence ID>A178000068
Genome IDCP001402
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus islandicus M.16.4 [CP001402]
Start position on genome 1745213
End posion on genome 1745300
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gtaaaatgat
tRNA gene sequence 
GCCGCCGTAGCTCAGCCTGGTTAGAGCGCCGGCCTCGTAAGCCGGCGGTCGCGGGTTCGA
ATCCCGCCGGCGGCTtta
Downstream region at tRNA end position 
aagcattatt
Secondary structure (Cloverleaf model)
>A178000068	Thr	CGT
                   t      Ttta aagcattatt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
    C C G A        A      | | | | |     G
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     CGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    C G T
intron: position=38, length=13 (in A-loop)
CCCAAAGTGAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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