The detailed information of tRNA gene sequence


Sequence ID>A178000088
Genome IDCP001404
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus islandicus Y.N.15.51 [CP001404]
Start position on genome 1272899
End posion on genome 1273000
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ataatagatT
tRNA gene sequence 
GCGGGGGTGCCCGAGCCTGGTCAAAGGGGGCGGACTTAAGATCCGCTGGCGAAGGCCTGC
ACGGGTTCGAATCCCGTCCCCCGCATaa
Downstream region at tRNA end position 
taactctatt
Secondary structure (Cloverleaf model)
>A178000088	Leu	TAA
                   T      ATaa taactctatt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
    C C G A        G      | | | | |     G
  T         G C C C       A C G G G     C
  G           | | |                 T T
  G         A G G G
    T C A A        G     TGGCGAAGGCCTGC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    T A A
intron: position=38, length=15 (in A-loop)
ACCCCCAAGTAAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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