The detailed information of tRNA gene sequence


Sequence ID>A178000098
Genome IDCP001742
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidilobus saccharovorans 345-15 [CP001742]
Start position on genome 258392
End posion on genome 258506
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
accaggcagg
tRNA gene sequence 
CCCGCCGTAGCTCAGCGGTCAGAGCGCCCGGCTGTAGACCGGGTGGTCCGGGGTTCAATT
CCCCGCGGCGGGACCA
Downstream region at tRNA end position 
gggcctgcca
Secondary structure (Cloverleaf model)
>A178000098	Tyr	GTA
                   g      ACCA gggcctgcca
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     G C C C C     A
      C G A        A      | | | | |     A
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    T       G A G C
      C A          G     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=39 (in A-loop)
TGGGACGGGGCGGCTGGAGGCCTAGCCCCTCCGGCCGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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