The detailed information of tRNA gene sequence


Sequence ID>A178000100
Genome IDCP001742
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidilobus saccharovorans 345-15 [CP001742]
Start position on genome 1106933
End posion on genome 1106841
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ggtctccgaa
tRNA gene sequence 
GGGCCCGTAGCTCAGCTCGGTGGAGCGCCCGGCTGATAACCGGGCGGTCGGGGGTTCAAA
TCCCCCCGGGCCCAtca
Downstream region at tRNA end position 
cataaaaggc
Secondary structure (Cloverleaf model)
>A178000100	Ile	GAT
                   a      Atca cataaaaggc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    C       | | | |                 T T
    G       G A G C
      G T G        G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    G A T
intron: position=38, length=19 (in A-loop)
TCAGCCAGGTATGTCAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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