The detailed information of tRNA gene sequence


Sequence ID>A178000116
Genome IDCP001868
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
Start position on genome 455785
End posion on genome 455889
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gcagacgaaa
tRNA gene sequence 
GCCGCCGTAGCTCAGTTGGTAGAGCACCTCGCTGTTAACGAGGTGGTCCCAGGTTCGAGT
CCTGGCGGCGGCGCtt
Downstream region at tRNA end position 
ctctcacttt
Secondary structure (Cloverleaf model)
>A178000116	Asn	GTT
                   a      GCtt ctctcacttt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A *
                    G T T
intron: position=38, length=31 (in A-loop)
GGGAATTCAGTTCCGGCTGTTTTCCGCAGCC
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK