The detailed information of tRNA gene sequence


Sequence ID>A178000129
Genome IDCP001939
Search identical group
Phylum/ClassThermoproteota
SpeciesThermosphaera aggregans DSM 11486 [CP001939]
Start position on genome 789480
End posion on genome 789585
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
attaatggac
tRNA gene sequence 
GGGCCCGTCGTCTAGCTTGGACTAGGATGCGGGGTTCGGGTCCCCGTGACCCGGGGTTCA
AATCCCCGCGGGCCCAtac
Downstream region at tRNA end position 
tcaacgcttc
Secondary structure (Cloverleaf model)
>A178000129	Pro	CGG
                   c      Atac tcaacgcttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    T C G A        C      | | | | |     A
  T         T C T G       C G G G G     C
  G         + | | +                 T T
  G         G G A T
    A C T A        G     TGACC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  T       T
                  T       G *
                    C G G
intron: position=38, length=30 (in A-loop)
ACCTGTTGGAGAAGCCGCTGAAGGCGGAAC
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK