The detailed information of tRNA gene sequence


Sequence ID>A178000134
Genome IDCP001941
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum boonei T469 [CP001941]
Start position on genome 370437
End posion on genome 370311
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
ttcctcccaa
tRNA gene sequence 
GCCCGAGTGGGGTAGCATGGATATCCTGGGGGCCTGCGGAGCCCTTGACCCGGGTTCGAA
TCCCGGCTCGGGCACta
Downstream region at tRNA end position 
tttattcaag
Secondary structure (Cloverleaf model)
>A178000134	Arg	GCG
                   a      ACta tttattcaag
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     G G C C C     A
    A C G A        G      | | | | |     G
  T         T G G G       C C G G G     C
  G           | | +                 T T
  G         T C C T
    A T A          G     TGAC
                    G + T
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    G C G
intron: position=38, length=52 (in A-loop)
AAAAGCCCCTTTAAAAAGGTGCTTTACCCGTAAAGAAGGGGGCTTTGCAGGT
Intron
Comment/Decision
Genome/Seq. Info.-

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