The detailed information of tRNA gene sequence


Sequence ID>A178000137
Genome IDCP001941
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum boonei T469 [CP001941]
Start position on genome 1053858
End posion on genome 1053988
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
acctcgaaaa
tRNA gene sequence 
GCCACCGTAGCTTAGCCCGGCAGAGCGGCTGATTCGTAATCAGCAGGTCGGGGGTTCGAA
TCCCCCCGGTGGCTCtt
Downstream region at tRNA end position 
tttcaggaaa
Secondary structure (Cloverleaf model)
>A178000137	Thr	CGT
                   a      TCtt tttcaggaaa
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
      C G A        A      | | | | |     G
    C       T T C G       G G G G G     C
    C       + | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A *
                    C G T
intron: position=38, length=56 (in A-loop)
AGAGCCCCTTTCTTAAAAAGAAAGGTGCTTCACCCCCAAAGAAGGGGCTCCGAGTT
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK