The detailed information of tRNA gene sequence


Sequence ID>A178000153
Genome IDCP002051
Search identical group
Phylum/ClassThermoproteota
SpeciesStaphylothermus hellenicus DSM 12710 [CP002051]
Start position on genome 1466748
End posion on genome 1466845
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
acatatttat
tRNA gene sequence 
GGGCCCGTAGCCTAGCCTGGATAGGGCGCCGGCCTGCGGAGCCGGAGGTCCCGGGTTCAA
ATCCCGGCGGGCCCGCtt
Downstream region at tRNA end position 
ctaacaatta
Secondary structure (Cloverleaf model)
>A178000153	Arg	GCG
                   t      GCtt ctaacaatta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         T C C G       C C G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    G C G
intron: position=38, length=22 (in A-loop)
AGAATAGCGGGGGTTCGTGGCT
Intron
Comment/Decision
Genome/Seq. Info.-

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