The detailed information of tRNA gene sequence


Sequence ID>A178000156
Genome IDCP002057
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanococcus voltae [CP002057]
Start position on genome 1437066
End posion on genome 1437181
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atatgtataa
tRNA gene sequence 
GGGAGTATGGTGTAGTCTGGTCTATCATCGGGGACTCCAAATCCCTGGACCTGGGTTCAA
ATCCCAGTACTCCCACtt
Downstream region at tRNA end position 
tttttataat
Secondary structure (Cloverleaf model)
>A178000156	Trp	CCA
                   a      ACtt tttttataat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T          T A
                    T     G A C C C     A
    C T G A        G      | | | | |     A
  T         T G T G       C T G G G     C
  G           | | +                 T T
  G         T C A T
    T C T A        C     GGAC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    C C A
intron: position=38, length=40 (in A-loop)
GTGCCTATACGGGCTTGGACCGAAACCCGATGCAGGAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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