The detailed information of tRNA gene sequence


Sequence ID>A178000175
Genome IDCP002363
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus mucosus DSM 2162 [CP002363]
Start position on genome 578880
End posion on genome 578774
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tacggttgaa
tRNA gene sequence 
GGGGCCGTCGTCTAGCCTGGCTAGGATGCCGGCCTGGGGCGCCGGTGGTCCCGGGTTCAA
ATCCCGGCGGCCCCACtc
Downstream region at tRNA end position 
gttgaaaatc
Secondary structure (Cloverleaf model)
>A178000175	Pro	GGG
                   a      ACtc gttgaaaatc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    C T A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       G *
                    G G G
intron: position=38, length=31 (in A-loop)
GGAGTACCCCCGTGGCCCAGGACTCCCGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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