The detailed information of tRNA gene sequence


Sequence ID>A178000181
Genome IDCP002408
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrososphaera gargensis Ga9.2 [CP002408]
Start position on genome 1218953
End posion on genome 1218864
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gagcgcacga
tRNA gene sequence 
GGTCACGTAGCTCAGCCTGGCCAGAGCGGCTGACTTGTAATCAGCAGGTCGTGGGTCCAA
ATCCCACCGTGACCTCtt
Downstream region at tRNA end position 
aattaaaatt
Secondary structure (Cloverleaf model)
>A178000181	Thr	TGT
                   a      TCtt aattaaaatt
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     A
  T         C T C G       G T G G G     C
  G         | | | |                 T C
  G         G A G C
    C C A          G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A *
                    T G T
intron: position=38, length=14 (in A-loop)
AACTTCGTCAAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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