The detailed information of tRNA gene sequence


Sequence ID>A178000213
Genome IDCP002529
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta moutnovskia 768-28 [CP002529]
Start position on genome 1848692
End posion on genome 1848781
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
acacaaactc
tRNA gene sequence 
GCCCCGGTAGCTCAGCCTGGTAGAGCGCTCGCTTGGTAAGCGAGAGGTCCCGGGTTCGAA
TCCCGGCCGGGGCTCCA
Downstream region at tRNA end position 
tttaaggcat
Secondary structure (Cloverleaf model)
>A178000213	Thr	GGT
                   c      TCCA tttaaggcat
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A *
                    G G T
intron: position=38, length=13 (in A-loop)
TGTTAACCCAAAT
Intron
Comment/Decision
Genome/Seq. Info.-

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