The detailed information of tRNA gene sequence


Sequence ID>A178000233
Genome IDCP002588
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus veneficus SNP6 [CP002588]
Start position on genome 73965
End posion on genome 74057
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atgttccaga
tRNA gene sequence 
GGGCCCGTGGCTCAGCCTGGTTAGAGCGCTCGCCTGATAAGCGAGAGGTCCGGGGTTCAA
ACCCCCGCGGGCCCACtc
Downstream region at tRNA end position 
gggcttttta
Secondary structure (Cloverleaf model)
>A178000233	Ile	GAT
                   a      ACtc gggcttttta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C A
                    T     G C C C C     A
    C C G A        G      | | | | |     A
  T         C T C G       C G G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A *
                    G A T
intron: position=38, length=17 (in A-loop)
AGGCGTATGCCGCAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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